ZKSCAN1

Zinc finger protein with KRAB and SCAN domains 1 is a protein that in humans is encoded by the ZKSCAN1 gene.

ZKSCAN1
Identifiers
Aliases	ZKSCAN1, 9130423L19Rik, KOX18, PHZ-37, ZNF139, ZNF36, ZSCAN33, zinc finger with KRAB and SCAN domains 1
External IDs	OMIM: 601260; MGI: 1921820; HomoloGene: 34523; GeneCards: ZKSCAN1; OMA:ZKSCAN1 - orthologs
Gene location (Human) Chr. Chromosome 7 (human) Band 7q22.1 Start 100,015,572 bp End 100,041,689 bp
Gene location (Mouse) Chr. Chromosome 5 (mouse) Band 5|5 G2 Start 138,083,346 bp End 138,106,084 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in skin of thigh bronchial epithelial cell skin of hip inferior ganglion of vagus nerve external globus pallidus subthalamic nucleus pars reticulata pylorus pars compacta cardia Top expressed in medullary collecting duct hand condyle genital tubercle urothelium cumulus cell fossa transitional epithelium of urinary bladder vas deferens renal corpuscle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding nucleic acid binding metal ion binding DNA binding DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific Cellular component intracellular anatomical structure nucleus Biological process regulation of transcription, DNA-templated transcription, DNA-templated regulation of transcription by RNA polymerase II Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 7586 74570 Ensembl ENSG00000106261 ENSMUSG00000029729 UniProt P17029 Q8BGS3 RefSeq (mRNA) NM_001287054 NM_001287055 NM_003439 NM_001346579 NM_001346580 NM_001346581 NM_029869 NM_133906 RefSeq (protein) NP_001273983 NP_001273984 NP_001333508 NP_001333509 NP_001333510 NP_003430 NP_084145 NP_598667 Location (UCSC) Chr 7: 100.02 – 100.04 Mb Chr 5: 138.08 – 138.11 Mb PubMed search
Wikidata
View/Edit Human View/Edit Mouse

See also

• Chromosome 7 (human)
• Krüppel associated box (KRAB) domain
• Zinc finger protein

Further reading

• Huebner K, Druck T, Croce CM, Thiesen HJ (1991). "Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering". Am. J. Hum. Genet. 48 (4): 726–40. PMC 1682948. PMID 2014798.
• Thiesen HJ (1991). "Multiple genes encoding zinc finger domains are expressed in human T cells". New Biol. 2 (4): 363–74. PMID 2288909.
• Rousseau-Merck MF, Duro D, Berger R, Thiesen HJ (1995). "Chromosomal localization of two KOX zinc finger genes on chromosome bands 7q21-q22". Ann. Genet. 38 (2): 81–4. PMID 7486829.
• Tommerup N, Vissing H (1995). "Isolation and fine mapping of 16 novel human zinc finger-encoding cDNAs identify putative candidate genes for developmental and malignant disorders". Genomics. 27 (2): 259–64. doi:10.1006/geno.1995.1040. PMID 7557990.
• Strausberg RL; Feingold EA; Grouse LH; et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Scherer SW; Cheung J; MacDonald JR; et al. (2003). "Human Chromosome 7: DNA Sequence and Biology". Science. 300 (5620): 767–72. Bibcode:2003Sci...300..767S. doi:10.1126/science.1083423. PMC 2882961. PMID 12690205.
• Jikuya H; Takano J; Kikuno R; et al. (2003). "Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones". DNA Res. 10 (1): 49–57. doi:10.1093/dnares/10.1.49. PMID 12693554.
• Ota T; Suzuki Y; Nishikawa T; et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Gerhard DS; Wagner L; Feingold EA; et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Olsen JV; Blagoev B; Gnad F; et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.